Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | ISP_002704 | P9WQM2 | Negative | 2824428 - 2825645 | 40872.0 |
| gntr family transcriptional regulator | ISP_002705 | Q82IW0 | Positive | 2825726 - 2826487 | 27718.3 |
| hypothetical protein | ISP_002706 | Not Available | Positive | 2826528 - 2827055 | 17523.2 |
| hypothetical protein | ISP_002707 | Not Available | Positive | 2827176 - 2827667 | 16654.0 |
| septal ring lytic transglycosylase rlpa family protein | ISP_002708 | P19435 | Positive | 2827871 - 2828542 | 22405.3 |
| fumarate hydratase | ISP_002709 | P0AC34 | Negative | 2828591 - 2830249 | 59996.4 |
| sigma-70 family rna polymerase sigma factor | ISP_002710 | P9WGI4 | Negative | 2830894 - 2831847 | 35355.2 |
| d-aminoacyl-trna deacylase | ISP_002711 | Q9K4F6 | Negative | 2832270 - 2832695 | 14737.8 |
| methyltransferase | ISP_002712 | B5F512 | Negative | 2832692 - 2834194 | 53556.9 |
| amidohydrolase | ISP_002713 | Q8GGD4 | Positive | 2834223 - 2835521 | 45332.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
