Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zf-hc2 domain-containing protein | ISP_002684 | H8EXN2 | Positive | 2802518 - 2803306 | 27135.8 |
| duf1996 domain-containing protein | ISP_002685 | Not Available | Positive | 2803583 - 2804989 | 50158.8 |
| sco0930 family lipoprotein | ISP_002686 | Not Available | Positive | 2805030 - 2805956 | 30800.4 |
| lrp/asnc family transcriptional regulator | ISP_002687 | Not Available | Negative | 2806802 - 2807866 | 37280.4 |
| m20 family metallopeptidase | ISP_002688 | P58156 | Positive | 2807935 - 2809134 | 42170.9 |
| hypothetical protein | ISP_002689 | Not Available | Positive | 2809212 - 2809406 | 6773.26 |
| amidohydrolase family protein | ISP_002690 | G3XP38 | Positive | 2809403 - 2810605 | 41745.1 |
| alpha/beta hydrolase | ISP_002691 | O07937 | Negative | 2810683 - 2811480 | 28310.8 |
| steroid 3-ketoacyl-coa thiolase | ISP_002692 | I6XHI4 | Negative | 2811535 - 2812692 | 39525.1 |
| cytochrome p450 | ISP_002693 | Q0S7M1 | Positive | 2812924 - 2814150 | 46076.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
