Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | ISP_002674 | O32161 | Negative | 2794357 - 2794767 | 14996.7 |
| helix-turn-helix transcriptional regulator | ISP_002675 | P55922 | Negative | 2794778 - 2795218 | 16364.6 |
| lysr family transcriptional regulator | ISP_002676 | Q9EXL7 | Negative | 2795266 - 2796156 | 31753.3 |
| mfs transporter | ISP_002677 | P9WG90 | Positive | 2796289 - 2797695 | 46347.3 |
| nad(p)/fad-dependent oxidoreductase | ISP_002678 | P43494 | Negative | 2798058 - 2799497 | 52123.4 |
| ferredoxin | ISP_002679 | P29604 | Negative | 2799490 - 2799720 | 8429.23 |
| ferric reductase-like transmembrane domain-containing protein | ISP_002680 | Not Available | Negative | 2799722 - 2800339 | 22631.9 |
| duf4142 domain-containing protein | ISP_002681 | Not Available | Negative | 2800332 - 2801123 | 27795.8 |
| hypothetical protein | ISP_002682 | Not Available | Negative | 2801107 - 2801709 | 20909.8 |
| sigma-70 family rna polymerase sigma factor | ISP_002683 | H8EXN1 | Positive | 2801950 - 2802510 | 21023.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
