Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | ISP_002644 | P94593 | Positive | 2763058 - 2765859 | 100846.0 |
| swim zinc finger family protein | ISP_002645 | O53500 | Positive | 2765859 - 2767019 | 41406.2 |
| hypothetical protein | ISP_002646 | Not Available | Negative | 2767330 - 2767782 | 16879.5 |
| alpha/beta hydrolase | ISP_002647 | Q50681 | Negative | 2767976 - 2769211 | 44359.9 |
| wax ester/triacylglycerol synthase family o-acyltransferase | ISP_002648 | P9WKB9 | Positive | 2769379 - 2770764 | 49933.3 |
| nitroreductase family deazaflavin-dependent oxidoreductase | ISP_002649 | O53328 | Negative | 2770748 - 2771245 | 18467.6 |
| alpha/beta hydrolase | ISP_002650 | Q2T4P1 | Negative | 2771245 - 2772096 | 30732.4 |
| acyl-coa dehydrogenase family protein | ISP_002651 | P71857 | Positive | 2772185 - 2773273 | 37038.1 |
| acyl-coa dehydrogenase family protein | ISP_002652 | P71858 | Positive | 2773279 - 2774433 | 42024.0 |
| ob-fold domain-containing protein | ISP_002653 | I6YGF8 | Positive | 2774430 - 2775338 | 32853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
