Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf742 domain-containing protein | ISP_002634 | Not Available | Positive | 2752250 - 2752966 | 24597.9 |
| atp/gtp-binding protein | ISP_002635 | O26859 | Positive | 2752995 - 2753558 | 20489.5 |
| duf899 domain-containing protein | ISP_002636 | Not Available | Negative | 2753695 - 2754345 | 24407.6 |
| srpbcc domain-containing protein | ISP_002637 | Not Available | Negative | 2754342 - 2754782 | 16149.8 |
| metalloregulator arsr/smtb family transcription factor | ISP_002638 | O32242 | Negative | 2754775 - 2755110 | 12376.8 |
| methylmalonyl-coa mutase family protein | ISP_002639 | Q5Z110 | Positive | 2755249 - 2758482 | 118409.0 |
| class i sam-dependent methyltransferase | ISP_002640 | B1MCE2 | Negative | 2758479 - 2759174 | 24889.3 |
| llm class f420-dependent oxidoreductase | ISP_002641 | P9WKN4 | Positive | 2759251 - 2760081 | 30537.3 |
| cholesterol catabolism transcriptional regulator kstr | ISP_002642 | A0R528 | Negative | 2760090 - 2760716 | 22951.8 |
| acyl-coa dehydrogenase | ISP_002643 | P96855 | Positive | 2760859 - 2762913 | 70644.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
