Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | ISP_002624 | Not Available | Positive | 2740230 - 2740712 | 17423.6 |
| lytic murein transglycosylase | ISP_002625 | Not Available | Positive | 2740835 - 2741743 | 30425.7 |
| hypothetical protein | ISP_002626 | P54134 | Positive | 2741854 - 2742204 | 13275.8 |
| duf3817 domain-containing protein | ISP_002627 | P9WM18 | Positive | 2742218 - 2742559 | 12225.5 |
| mfs transporter | ISP_002628 | Q04733 | Negative | 2742537 - 2743970 | 49405.6 |
| tetr/acrr family transcriptional regulator | ISP_002629 | Q6GKL1 | Positive | 2744106 - 2744669 | 20685.8 |
| cation acetate symporter | ISP_002630 | Q8NS49 | Negative | 2744689 - 2746281 | 55326.4 |
| duf485 domain-containing protein | ISP_002631 | P39600 | Negative | 2746278 - 2746700 | 15859.2 |
| nitrate- and nitrite sensing domain-containing protein | ISP_002632 | A3Q5L8 | Positive | 2747750 - 2751793 | 139525.0 |
| roadblock/lc7 domain-containing protein | ISP_002633 | O50393 | Positive | 2751790 - 2752242 | 15469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
