Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | ISP_002584 | P29824 | Positive | 2701953 - 2702843 | 31609.2 |
| gh1 family beta-glucosidase | ISP_002585 | P94248 | Positive | 2702862 - 2704220 | 50218.6 |
| long-chain fatty acid--coa ligase | ISP_002586 | Q7TYX8 | Negative | 2704282 - 2706078 | 63896.9 |
| polyketide cyclase / dehydrase and lipid transport | ISP_002587 | Not Available | Positive | 2706207 - 2706614 | 14975.0 |
| metallophosphoesterase | ISP_002588 | Not Available | Positive | 2706625 - 2707419 | 28733.1 |
| srpbcc family protein | ISP_002589 | Not Available | Positive | 2707447 - 2707881 | 16056.3 |
| arsa family atpase | ISP_002590 | O53518 | Positive | 2707883 - 2709016 | 39510.9 |
| hypothetical protein | ISP_002591 | Not Available | Positive | 2709013 - 2709540 | 18372.6 |
| rok family protein | ISP_002592 | P0A4E1 | Positive | 2709556 - 2710494 | 32122.6 |
| hypothetical protein | ISP_002593 | Not Available | Positive | 2710720 - 2711007 | 9814.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
