Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | ISP_002544 | P49309 | Positive | 2659043 - 2660455 | 50784.1 |
| hypothetical protein | ISP_002545 | Not Available | Positive | 2660452 - 2660898 | 16094.8 |
| cbs domain-containing protein | ISP_002546 | Q9LEV3 | Positive | 2661001 - 2661432 | 15191.4 |
| mucoidy inhibitor muia family protein | ISP_002547 | O44400 | Negative | 2661472 - 2663022 | 55038.9 |
| xaa-pro dipeptidyl-peptidase | ISP_002548 | Q81PE9 | Positive | 2663108 - 2664907 | 63850.6 |
| ydcf family protein | ISP_002549 | Q04310 | Positive | 2664907 - 2665578 | 24725.6 |
| fad-binding oxidoreductase | ISP_002550 | A0A2V5HCN7 | Positive | 2665636 - 2667033 | 49410.3 |
| response regulator transcription factor | ISP_002551 | P55184 | Negative | 2667038 - 2667679 | 22293.0 |
| histidine kinase | ISP_002552 | P94438 | Negative | 2667676 - 2668788 | 39181.6 |
| m23 family metallopeptidase | ISP_002553 | P12690 | Positive | 2668885 - 2669739 | 29130.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
