Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nrdr | ISP_002534 | A4FAK5 | Positive | 2647129 - 2647623 | 18249.4 |
| vitamin b12-dependent ribonucleotide reductase | ISP_002535 | O69981 | Positive | 2647654 - 2650467 | 102261.0 |
| hypothetical protein | ISP_002536 | Not Available | Negative | 2650536 - 2651876 | 48936.6 |
| nb-arc domain-containing protein | ISP_002537 | Not Available | Negative | 2651873 - 2653540 | 60559.7 |
| ferritin-like domain-containing protein | ISP_002538 | Not Available | Positive | 2653702 - 2654448 | 27332.2 |
| nad(p)h-dependent oxidoreductase | ISP_002539 | Q5YR63 | Positive | 2654463 - 2655092 | 22891.1 |
| smr family transporter | ISP_002540 | O69279 | Positive | 2655092 - 2655301 | 7310.18 |
| prolyl oligopeptidase family serine peptidase | ISP_002541 | P55577 | Negative | 2655291 - 2657303 | 74598.0 |
| neutral zinc metallopeptidase | ISP_002542 | P9WL84 | Positive | 2657417 - 2658394 | 34000.8 |
| tigr03086 family metal-binding protein | ISP_002543 | P9WKS2 | Negative | 2658387 - 2658959 | 20724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
