Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf349 domain-containing protein | ISP_002524 | A0QVX6 | Negative | 2634693 - 2636006 | 48663.5 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | ISP_002525 | A4FAJ5 | Positive | 2636225 - 2637136 | 32634.8 |
| diaminopimelate epimerase | ISP_002526 | C1B393 | Positive | 2637147 - 2637974 | 28694.9 |
| valine--trna ligase | ISP_002527 | Q47NK0 | Negative | 2637991 - 2640504 | 93062.3 |
| mfs transporter | ISP_002528 | O32859 | Negative | 2640514 - 2641767 | 43585.1 |
| winged helix-turn-helix domain-containing protein | ISP_002529 | Not Available | Positive | 2641831 - 2642334 | 18436.0 |
| gtpase hflx | ISP_002530 | D9R4W7 | Positive | 2642377 - 2643825 | 52482.2 |
| esterase-like activity of phytase family protein | ISP_002531 | Not Available | Positive | 2643878 - 2644894 | 34736.4 |
| transcriptional repressor lexa | ISP_002532 | A5U672 | Negative | 2644968 - 2645627 | 23925.8 |
| lysm peptidoglycan-binding domain-containing protein | ISP_002533 | I6YA32 | Positive | 2645986 - 2646450 | 15972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
