Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin domain-containing protein | ISP_002514 | Not Available | Positive | 2623747 - 2625183 | 51065.6 |
| glycoside hydrolase family 5 protein | ISP_002515 | A0A3S5YBC7 | Positive | 2625264 - 2627015 | 63371.0 |
| hypothetical protein | ISP_002516 | Not Available | Positive | 2627199 - 2627525 | 11038.3 |
| tetr/acrr family transcriptional regulator | ISP_002517 | Not Available | Negative | 2627550 - 2628215 | 23605.1 |
| fad-dependent monooxygenase | ISP_002518 | Q01911 | Positive | 2628299 - 2629408 | 38504.7 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | ISP_002519 | P04483 | Negative | 2629409 - 2630092 | 24541.3 |
| fad-dependent monooxygenase | ISP_002520 | Q01911 | Positive | 2630160 - 2631269 | 39985.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | ISP_002521 | A4FAJ1 | Positive | 2631721 - 2633214 | 53937.1 |
| hypothetical protein | ISP_002522 | A0QIR4 | Positive | 2633211 - 2633684 | 16464.0 |
| hypothetical protein | ISP_002523 | Not Available | Negative | 2633704 - 2634150 | 15339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
