Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | ISP_002504 | P48243 | Negative | 2614506 - 2615234 | 26308.3 |
| response regulator transcription factor | ISP_002505 | P0A5Z7 | Positive | 2615513 - 2616184 | 24087.2 |
| hamp domain-containing histidine kinase | ISP_002506 | Q04943 | Positive | 2616189 - 2617586 | 49507.5 |
| taxi family trap transporter solute-binding subunit | ISP_002507 | P0A3T3 | Negative | 2617583 - 2618509 | 32916.6 |
| helix-turn-helix transcriptional regulator | ISP_002508 | O32238 | Negative | 2618546 - 2618788 | 8830.92 |
| hypothetical protein | ISP_002509 | Not Available | Positive | 2618781 - 2619179 | 14670.1 |
| is30 family transposase | ISP_002510 | Q934J6 | Positive | 2619794 - 2620489 | 24704.9 |
| is30 family transposase | ISP_002511 | A0A0H3GGE2 | Positive | 2621000 - 2621104 | 3306.86 |
| endonuclease | ISP_002512 | P64744 | Positive | 2621443 - 2622768 | 46584.2 |
| serine/threonine protein kinase | ISP_002513 | Q8XJL8 | Negative | 2622753 - 2623469 | 24870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
