Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | ISP_002494 | P9WN88 | Positive | 2607397 - 2608149 | 28646.2 |
| gnat family n-acetyltransferase | ISP_002495 | Not Available | Positive | 2608231 - 2608755 | 19050.7 |
| duf397 domain-containing protein | ISP_002496 | Not Available | Negative | 2608819 - 2609004 | 6658.76 |
| helix-turn-helix domain-containing protein | ISP_002497 | Not Available | Negative | 2609008 - 2609859 | 32786.8 |
| duf1275 domain-containing protein | ISP_002498 | O34343 | Positive | 2610068 - 2610778 | 23555.1 |
| hypothetical protein | ISP_002499 | Not Available | Positive | 2610878 - 2611033 | 5516.68 |
| sdr family oxidoreductase | ISP_002500 | Q48436 | Negative | 2611030 - 2611767 | 25469.3 |
| amino acid abc transporter permease | ISP_002501 | P48245 | Negative | 2611843 - 2612703 | 31311.8 |
| amino acid abc transporter permease | ISP_002502 | P48244 | Negative | 2612777 - 2613424 | 23087.8 |
| glutamate abc transporter substrate-binding protein | ISP_002503 | Q8RQL6 | Negative | 2613511 - 2614437 | 32436.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
