Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maleylpyruvate isomerase family mycothiol-dependent enzyme | ISP_002474 | Not Available | Positive | 2583156 - 2583923 | 27876.8 |
| voc family protein | ISP_002475 | Not Available | Positive | 2583983 - 2584714 | 26224.1 |
| gnat family n-acetyltransferase | ISP_002476 | Not Available | Positive | 2584925 - 2585986 | 37733.0 |
| peptide deformylase | ISP_002477 | A0LUE1 | Negative | 2585989 - 2586489 | 18772.4 |
| dead/deah box helicase | ISP_002478 | P30015 | Negative | 2587054 - 2591724 | 165904.0 |
| deor/glpr family dna-binding transcription regulator | ISP_002479 | P32104 | Negative | 2591717 - 2592505 | 27923.2 |
| mfs transporter | ISP_002480 | P70786 | Negative | 2592477 - 2593817 | 48008.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ISP_002481 | Q6AB12 | Negative | 2593814 - 2594842 | 35997.3 |
| hsp70 family protein | ISP_002482 | B7J5X3 | Positive | 2595289 - 2597133 | 64087.3 |
| duf3046 domain-containing protein | ISP_002483 | Not Available | Positive | 2597179 - 2597373 | 7067.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
