Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | ISP_002464 | P54977 | Negative | 2572132 - 2573058 | 33947.9 |
| phytoene desaturase family protein | ISP_002465 | P54981 | Negative | 2573055 - 2574527 | 52233.6 |
| polyprenyl synthetase family protein | ISP_002466 | O53507 | Negative | 2574529 - 2575620 | 37467.6 |
| alkylmercury lyase family protein | ISP_002467 | Not Available | Negative | 2575681 - 2576370 | 24930.5 |
| methylenetetrahydrofolate reductase | ISP_002468 | O54235 | Positive | 2576466 - 2577350 | 32315.8 |
| duf885 domain-containing protein | ISP_002469 | Not Available | Positive | 2577455 - 2579143 | 61133.0 |
| eama family transporter | ISP_002470 | P39649 | Positive | 2579508 - 2580377 | 28986.1 |
| gnat family n-acetyltransferase | ISP_002471 | Not Available | Negative | 2580396 - 2580968 | 21642.8 |
| is30 family transposase | ISP_002472 | Not Available | Negative | 2580965 - 2581408 | 14512.3 |
| sav_6107 family hepn domain-containing protein | ISP_002473 | Not Available | Positive | 2581937 - 2583166 | 40999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
