Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase trpc | ISP_002434 | A4FLL0 | Positive | 2534389 - 2535198 | 28254.1 |
| tryptophan synthase subunit beta | ISP_002435 | B1W0P0 | Positive | 2535177 - 2536406 | 43984.1 |
| tryptophan synthase subunit alpha | ISP_002436 | Q5YYN3 | Positive | 2536403 - 2537194 | 26774.7 |
| merr family transcriptional regulator | ISP_002437 | P44558 | Positive | 2537228 - 2537605 | 14508.4 |
| uma2 family endonuclease | ISP_002438 | Not Available | Positive | 2537764 - 2538330 | 20461.7 |
| peptidoglycan recognition protein family protein | ISP_002439 | Q8INK6 | Positive | 2538378 - 2539034 | 23655.8 |
| hypothetical protein | ISP_002440 | Not Available | Negative | 2539039 - 2540322 | 43990.1 |
| glutamine synthetase family protein | ISP_002441 | Q9KZC7 | Negative | 2540450 - 2541811 | 48039.7 |
| apc family permease | ISP_002442 | P76037 | Positive | 2541866 - 2543299 | 48742.2 |
| amidohydrolase family protein | ISP_002443 | P38094 | Positive | 2543296 - 2544420 | 40058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
