Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ISP_002414 | O69786 | Positive | 2519866 - 2520459 | 21706.1 |
| duf1330 domain-containing protein | ISP_002415 | Not Available | Positive | 2520518 - 2520859 | 12241.6 |
| gnat family n-acetyltransferase | ISP_002416 | Not Available | Positive | 2520907 - 2521383 | 17609.0 |
| ppox class f420-dependent oxidoreductase | ISP_002417 | Not Available | Negative | 2521367 - 2521753 | 14108.1 |
| putative glycolipid-binding domain-containing protein | ISP_002418 | Not Available | Negative | 2521750 - 2522310 | 20170.7 |
| hypothetical protein | ISP_002419 | Not Available | Positive | 2522442 - 2523380 | 32673.7 |
| hypothetical protein | ISP_002420 | Not Available | Negative | 2523370 - 2524347 | 33811.4 |
| sige family rna polymerase sigma factor | ISP_002421 | Q82EA9 | Negative | 2524344 - 2524844 | 18715.4 |
| phytase | ISP_002422 | O66037 | Negative | 2524915 - 2526087 | 41231.4 |
| imidazole glycerol phosphate synthase subunit hisf | ISP_002423 | A6WC96 | Positive | 2526217 - 2526990 | 27115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
