Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion integral membrane protein eccd | ISP_002384 | P9WNQ0 | Positive | 2494868 - 2496238 | 45767.7 |
| glucuronoxylanase | ISP_002385 | Q45070 | Positive | 2496327 - 2497595 | 46107.3 |
| type vii secretion protein ecce | ISP_002386 | Not Available | Negative | 2497669 - 2498709 | 36647.4 |
| type vii secretion protein eccb | ISP_002387 | P9WNR0 | Positive | 2498851 - 2500272 | 47582.0 |
| response regulator transcription factor | ISP_002388 | P9WGM4 | Positive | 2500284 - 2500979 | 24541.7 |
| response regulator transcription factor | ISP_002389 | P9WGM4 | Positive | 2500976 - 2501623 | 23382.2 |
| carbon-nitrogen hydrolase family protein | ISP_002390 | P9WJ00 | Negative | 2501696 - 2502490 | 27311.2 |
| histidinol dehydrogenase | ISP_002391 | Q5YYQ0 | Positive | 2502575 - 2503900 | 46013.7 |
| histidinol-phosphate transaminase | ISP_002392 | A3Q130 | Positive | 2503897 - 2504997 | 39423.5 |
| imidazoleglycerol-phosphate dehydratase hisb | ISP_002393 | A4FLN6 | Positive | 2504994 - 2505593 | 21596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
