Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc ligand binding domain-containing protein | ISP_002344 | O59579 | Negative | 2451617 - 2451898 | 9713.49 |
| dedd exonuclease domain-containing protein | ISP_002345 | P9WLJ0 | Negative | 2452258 - 2453961 | 60658.9 |
| nyn domain-containing protein | ISP_002346 | Not Available | Positive | 2454080 - 2455477 | 49120.2 |
| hypothetical protein | ISP_002347 | Not Available | Positive | 2455544 - 2455801 | 9118.92 |
| nlpc/p60 family protein | ISP_002348 | P9WHU2 | Positive | 2456245 - 2457303 | 36564.0 |
| glycosyltransferase family 4 protein | ISP_002349 | A0R043 | Positive | 2457442 - 2458599 | 41668.3 |
| uridine kinase | ISP_002350 | Not Available | Negative | 2458596 - 2459210 | 22194.5 |
| srpbcc domain-containing protein | ISP_002351 | Not Available | Positive | 2459275 - 2459688 | 15331.8 |
| cytochrome p450 | ISP_002352 | P33271 | Positive | 2459712 - 2460923 | 43714.6 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | ISP_002353 | Q9FCC2 | Positive | 2461047 - 2462327 | 45127.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
