Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ISP_002334 | Q9HTH5 | Negative | 2442982 - 2443941 | 33875.1 |
| dmt family transporter | ISP_002335 | Q07835 | Positive | 2444025 - 2444954 | 32073.8 |
| anthranilate phosphoribosyltransferase | ISP_002336 | A4FAC5 | Negative | 2444947 - 2445981 | 35214.8 |
| hypothetical protein | ISP_002337 | P9WGL6 | Negative | 2445987 - 2446397 | 14617.6 |
| ribonuclease e inhibitor rrab | ISP_002338 | Not Available | Negative | 2446523 - 2446936 | 14684.6 |
| heme-copper oxidase subunit iii | ISP_002339 | Q5YZ19 | Positive | 2447032 - 2447655 | 22997.3 |
| c-type cytochrome | ISP_002340 | P63888 | Positive | 2447722 - 2448540 | 28469.8 |
| rieske 2fe-2s domain-containing protein | ISP_002341 | Q7TYX4 | Positive | 2448537 - 2449703 | 42830.9 |
| cytochrome bc complex cytochrome b subunit | ISP_002342 | P15878 | Positive | 2449700 - 2451382 | 61613.9 |
| ydei/ompd-associated family protein | ISP_002343 | Not Available | Negative | 2451438 - 2451620 | 6516.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
