Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase family protein | ISP_002324 | Q40648 | Negative | 2434896 - 2435885 | 36085.6 |
| hypothetical protein | ISP_002325 | Not Available | Negative | 2435944 - 2436159 | 8025.91 |
| duf3043 domain-containing protein | ISP_002326 | P9WLI4 | Negative | 2436404 - 2437051 | 24128.9 |
| iron-sulfur cluster assembly accessory protein | ISP_002327 | P9WMN4 | Positive | 2437197 - 2437574 | 13498.6 |
| hypothetical protein | ISP_002328 | Not Available | Negative | 2437654 - 2437824 | 6019.2 |
| carbohydrate kinase family protein | ISP_002329 | P83736 | Positive | 2437973 - 2438965 | 35142.9 |
| hypothetical protein | ISP_002330 | Not Available | Negative | 2439024 - 2439236 | 7710.5 |
| asparagine synthase (glutamine-hydrolyzing) | ISP_002331 | P64248 | Negative | 2439310 - 2441244 | 71959.4 |
| cytochrome c oxidase subunit ii | ISP_002332 | Q5YZ37 | Positive | 2441429 - 2442373 | 34930.7 |
| cytochrome c oxidase subunit 4 | ISP_002333 | Q5YZ36 | Positive | 2442405 - 2442824 | 14964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
