Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | ISP_002304 | Q0SHK6 | Negative | 2415108 - 2415851 | 26861.9 |
| phosphatase pap2 family protein | ISP_002305 | P80143 | Negative | 2415848 - 2416471 | 21942.7 |
| tigr01777 family oxidoreductase | ISP_002306 | O32960 | Negative | 2416468 - 2417343 | 31110.2 |
| 2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferase | ISP_002307 | P65634 | Negative | 2417565 - 2419358 | 61842.4 |
| dihydrolipoyl dehydrogenase | ISP_002308 | P54533 | Negative | 2419414 - 2420787 | 47996.4 |
| oxidoreductase | ISP_002309 | Not Available | Positive | 2420970 - 2421314 | 13184.8 |
| gnat family n-acetyltransferase | ISP_002310 | Not Available | Negative | 2421311 - 2421763 | 16514.7 |
| smi1/knr4 family protein | ISP_002311 | Not Available | Negative | 2421774 - 2422733 | 33782.4 |
| taxi family trap transporter solute-binding subunit | ISP_002312 | P0A3T3 | Negative | 2422744 - 2423718 | 33365.1 |
| trap transporter fused permease subunit | ISP_002313 | P44993 | Negative | 2423715 - 2425679 | 68738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
