Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | ISP_002284 | P35320 | Positive | 2385306 - 2386253 | 33281.3 |
| aminotransferase class v-fold plp-dependent enzyme | ISP_002285 | O27442 | Negative | 2386250 - 2387410 | 41452.9 |
| gntr family transcriptional regulator | ISP_002286 | O05494 | Positive | 2387457 - 2388083 | 22805.6 |
| metallophosphoesterase | ISP_002287 | Q93GX3 | Positive | 2388080 - 2388838 | 26055.1 |
| coce/nond family hydrolase | ISP_002288 | Q9L9D7 | Negative | 2388828 - 2390453 | 58462.8 |
| aspartate ammonia-lyase | ISP_002289 | Q9HTD7 | Negative | 2390504 - 2391895 | 48790.6 |
| asparaginase | ISP_002290 | Not Available | Negative | 2391892 - 2392803 | 31118.3 |
| amino acid permease | ISP_002291 | Q9X7P0 | Negative | 2392800 - 2394230 | 50794.2 |
| fadr family transcriptional regulator | ISP_002292 | O07007 | Negative | 2394227 - 2394874 | 23303.4 |
| dna polymerase iii subunit alpha | ISP_002293 | P34699 | Positive | 2395219 - 2398806 | 131833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
