Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_002274 | Not Available | Negative | 2378609 - 2378989 | 14206.7 |
| multiubiquitin domain-containing protein | ISP_002275 | Not Available | Negative | 2379004 - 2379273 | 9586.4 |
| helix-turn-helix domain-containing protein | ISP_002276 | Not Available | Positive | 2379381 - 2379737 | 13135.4 |
| imma/irre family metallo-endopeptidase | ISP_002277 | Not Available | Positive | 2379743 - 2380318 | 21860.8 |
| hypothetical protein | ISP_002278 | Not Available | Negative | 2380325 - 2380618 | 10792.0 |
| mfs transporter | ISP_002279 | A0R5K5 | Negative | 2380804 - 2382249 | 48917.3 |
| carboxymuconolactone decarboxylase family protein | ISP_002280 | Not Available | Negative | 2382361 - 2382855 | 17600.3 |
| marr family winged helix-turn-helix transcriptional regulator | ISP_002281 | O31472 | Positive | 2382984 - 2383448 | 16753.9 |
| cupin domain-containing protein | ISP_002282 | Not Available | Negative | 2383649 - 2384065 | 14243.1 |
| acyl-coa dehydrogenase family protein | ISP_002283 | P45857 | Positive | 2384130 - 2385266 | 40326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
