Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-hydroxy-acid oxidizing protein | ISP_002244 | P9WND4 | Negative | 2350621 - 2351832 | 44379.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | ISP_002245 | A0R0B0 | Negative | 2351916 - 2354711 | 102753.0 |
| duf3052 domain-containing protein | ISP_002246 | P9WLG8 | Positive | 2355129 - 2355560 | 15350.9 |
| peroxiredoxin | ISP_002247 | P65689 | Positive | 2355634 - 2356098 | 16911.8 |
| Trna-val | Not Available | Not Available | Positive | 2356139 - 2356213 | Not Available |
| recombinase family protein | ISP_002249 | P17867 | Negative | 2356170 - 2357915 | 64411.4 |
| recombinase family protein | ISP_002250 | Not Available | Negative | 2357945 - 2358400 | 16655.5 |
| hypothetical protein | ISP_002251 | Not Available | Negative | 2358583 - 2358939 | 12620.8 |
| site-specific dna-methyltransferase | ISP_002252 | P14230 | Negative | 2359015 - 2360052 | 37628.1 |
| replication-relaxation family protein | ISP_002253 | Not Available | Negative | 2360049 - 2360864 | 30065.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
