Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase 87 family protein | ISP_002204 | P9WMZ8 | Positive | 2309383 - 2310639 | 44964.3 |
| voc family protein | ISP_002205 | Not Available | Negative | 2310885 - 2311238 | 12480.9 |
| proline--trna ligase | ISP_002206 | Q47RV7 | Positive | 2311363 - 2313111 | 63502.4 |
| hypothetical protein | ISP_002207 | Not Available | Positive | 2313111 - 2313962 | 29225.3 |
| hypothetical protein | ISP_002208 | Not Available | Positive | 2314009 - 2314683 | 25303.6 |
| duf2156 domain-containing protein | ISP_002209 | P35867 | Negative | 2314661 - 2316781 | 75888.4 |
| hypothetical protein | ISP_002210 | Not Available | Negative | 2316980 - 2317156 | 6343.25 |
| hypothetical protein | ISP_002211 | Not Available | Negative | 2317201 - 2317464 | 9639.38 |
| rhs repeat protein | ISP_002212 | Not Available | Negative | 2317464 - 2320643 | 110020.0 |
| haloacid dehalogenase-like hydrolase | ISP_002213 | Not Available | Negative | 2320898 - 2321593 | 24268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
