Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ISP_002164 | Q180E3 | Positive | 2271387 - 2273156 | 62441.0 |
| peptidylprolyl isomerase | ISP_002165 | P46697 | Negative | 2273206 - 2273865 | 23278.2 |
| duf2631 domain-containing protein | ISP_002166 | Q8NP09 | Negative | 2273891 - 2274148 | 9643.87 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | ISP_002167 | B2HJP9 | Positive | 2274243 - 2275445 | 41649.6 |
| site-2 protease family protein | ISP_002168 | A0QVH8 | Positive | 2275449 - 2276675 | 43837.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | ISP_002169 | A9WR14 | Positive | 2276789 - 2277940 | 40403.8 |
| class i sam-dependent methyltransferase | ISP_002170 | Q8PK00 | Positive | 2278008 - 2278631 | 22109.2 |
| hypothetical protein | ISP_002171 | Not Available | Negative | 2278620 - 2278874 | 8916.54 |
| arac family transcriptional regulator | ISP_002172 | P43458 | Positive | 2278990 - 2279817 | 30336.5 |
| voc family protein | ISP_002173 | Not Available | Positive | 2279822 - 2280214 | 13933.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
