Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | ISP_002154 | Q58860 | Negative | 2258655 - 2259866 | 42703.6 |
| duf1295 domain-containing protein | ISP_002155 | O74507 | Positive | 2259897 - 2260676 | 29073.1 |
| is30 family transposase | ISP_002156 | Q5QGZ8 | Positive | 2260780 - 2260935 | 5315.39 |
| sdr family oxidoreductase | ISP_002157 | P50199 | Negative | 2261167 - 2261976 | 26113.0 |
| lysr family transcriptional regulator | ISP_002158 | P77559 | Negative | 2262069 - 2262962 | 31716.3 |
| cytochrome p450 | ISP_002159 | Q0S7M1 | Negative | 2262962 - 2264215 | 46342.4 |
| alpha/beta hydrolase | ISP_002160 | Q609V0 | Positive | 2264325 - 2265053 | 24941.1 |
| tetratricopeptide repeat protein | ISP_002161 | P25941 | Positive | 2265296 - 2268541 | 116556.0 |
| methyltransferase domain-containing protein | ISP_002162 | P20187 | Negative | 2268639 - 2269421 | 27765.7 |
| plp-dependent aminotransferase family protein | ISP_002163 | P49309 | Positive | 2269450 - 2270904 | 51658.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
