Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-binding protein | ISP_002144 | B1VN94 | Positive | 2251571 - 2252386 | 28829.3 |
| m48 family metalloprotease | ISP_002145 | Q1QXV6 | Positive | 2252613 - 2253491 | 32132.9 |
| nad(p)-dependent alcohol dehydrogenase | ISP_002146 | Q9SV68 | Negative | 2253457 - 2254443 | 34396.7 |
| helix-turn-helix transcriptional regulator | ISP_002147 | Q57720 | Negative | 2254440 - 2254664 | 8322.04 |
| hypothetical protein | ISP_002148 | Not Available | Negative | 2254658 - 2255110 | 16204.0 |
| ycii family protein | ISP_002149 | Q52996 | Positive | 2255213 - 2255563 | 12219.3 |
| rna polymerase sigma factor | ISP_002150 | Q52997 | Positive | 2255569 - 2256825 | 45282.7 |
| enoyl-coa hydratase/isomerase family protein | ISP_002151 | O23300 | Negative | 2257041 - 2257661 | 21648.9 |
| tetr/acrr family transcriptional regulator | ISP_002152 | Not Available | Negative | 2257658 - 2258251 | 21126.6 |
| arsenate reductase family protein | ISP_002153 | P19434 | Positive | 2258305 - 2258658 | 13048.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
