Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | ISP_002124 | P9WIT0 | Negative | 2230678 - 2232012 | 46788.7 |
| abc transporter substrate-binding protein | ISP_002125 | Not Available | Negative | 2232024 - 2233214 | 41286.9 |
| abc transporter permease | ISP_002126 | Q9K9G6 | Negative | 2233244 - 2234113 | 31226.8 |
| abc transporter atp-binding protein | ISP_002127 | Q2YJB5 | Negative | 2234113 - 2234880 | 27519.1 |
| amidohydrolase family protein | ISP_002128 | B9J8S0 | Negative | 2234892 - 2236142 | 43040.6 |
| xre family transcriptional regulator | ISP_002129 | P55409 | Positive | 2236249 - 2236902 | 23758.3 |
| pdr/vanb family oxidoreductase | ISP_002130 | Q52186 | Positive | 2236899 - 2237831 | 32780.7 |
| amidohydrolase family protein | ISP_002131 | Q9I6Z0 | Positive | 2237838 - 2239133 | 44050.5 |
| hypothetical protein | ISP_002132 | Not Available | Positive | 2239298 - 2240182 | 29915.1 |
| duf2079 domain-containing protein | ISP_002133 | Not Available | Negative | 2240498 - 2242150 | 56454.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
