Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | ISP_002114 | Q59637 | Positive | 2216706 - 2219000 | 81538.1 |
| hypothetical protein | ISP_002115 | Not Available | Negative | 2218993 - 2219571 | 20027.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | ISP_002116 | A4FMC5 | Positive | 2219727 - 2220833 | 39770.0 |
| hypothetical protein | ISP_002117 | Not Available | Positive | 2220868 - 2221134 | 9908.78 |
| hypothetical protein | ISP_002118 | Not Available | Positive | 2221798 - 2222094 | 9997.73 |
| pa14 domain-containing protein | ISP_002119 | D4G3R4 | Positive | 2222440 - 2228745 | 221625.0 |
| hypothetical protein | ISP_002120 | Not Available | Positive | 2228720 - 2229148 | 15830.0 |
| is30 family transposase | ISP_002121 | Not Available | Positive | 2229328 - 2229484 | 5121.68 |
| hypothetical protein | ISP_002122 | Not Available | Positive | 2229583 - 2229852 | 10026.0 |
| creatininase family protein | ISP_002123 | P9WP58 | Negative | 2229876 - 2230667 | 28277.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
