Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | ISP_002104 | A4FMD5 | Positive | 2208489 - 2209232 | 26438.0 |
| ribosome recycling factor | ISP_002105 | A4FMD4 | Positive | 2209281 - 2209838 | 20716.7 |
| phosphatidate cytidylyltransferase | ISP_002106 | P63759 | Positive | 2210348 - 2211301 | 31999.6 |
| voc family protein | ISP_002107 | P0A5N9 | Negative | 2211298 - 2212143 | 30557.8 |
| class i sam-dependent methyltransferase | ISP_002108 | P20187 | Positive | 2212257 - 2213066 | 29872.2 |
| padr family transcriptional regulator | ISP_002109 | P64588 | Negative | 2213006 - 2213626 | 22164.8 |
| is30 family transposase | ISP_002110 | P23876 | Positive | 2213807 - 2214322 | 17863.3 |
| iron chelate uptake abc transporter family permease subunit | ISP_002111 | P23877 | Positive | 2214603 - 2214989 | 12770.9 |
| abc transporter atp-binding protein | ISP_002112 | P23878 | Positive | 2214998 - 2215576 | 20270.6 |
| iron-siderophore abc transporter substrate-binding protein | ISP_002113 | O31567 | Positive | 2215764 - 2216561 | 28111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
