Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2469 domain-containing protein | ISP_002094 | P9WL26 | Positive | 2197988 - 2198311 | 12697.9 |
| yran family protein | ISP_002095 | Q5YS49 | Positive | 2198586 - 2198963 | 14457.4 |
| yifb family mg chelatase-like aaa atpase | ISP_002096 | P9WPR1 | Positive | 2198963 - 2200474 | 52645.6 |
| hypothetical protein | ISP_002097 | Not Available | Positive | 2200881 - 2201474 | 20092.7 |
| dna-processing protein dpra | ISP_002098 | P9WL28 | Positive | 2201471 - 2202613 | 39556.2 |
| tyrosine recombinase xerc | ISP_002099 | A3PXY1 | Positive | 2202717 - 2203697 | 34455.4 |
| flia/whig family rna polymerase sigma factor | ISP_002100 | P17211 | Positive | 2203807 - 2204655 | 30684.5 |
| m23 family metallopeptidase | ISP_002101 | P9WL32 | Negative | 2204656 - 2205291 | 21806.1 |
| 30s ribosomal protein s2 | ISP_002102 | A4TC67 | Positive | 2206225 - 2207100 | 31732.9 |
| translation elongation factor ts | ISP_002103 | A4FMD6 | Positive | 2207556 - 2208371 | 29345.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
