Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | ISP_002084 | Not Available | Positive | 2191088 - 2191813 | 25730.5 |
| cpbp family intramembrane metalloprotease | ISP_002085 | Not Available | Positive | 2191915 - 2192718 | 28686.5 |
| 30s ribosomal protein s16 | ISP_002086 | A4FMF1 | Positive | 2192890 - 2193333 | 16096.3 |
| rna-binding protein | ISP_002087 | P67237 | Positive | 2193330 - 2193569 | 8588.37 |
| ribosome maturation factor rimm | ISP_002088 | B1MDI4 | Positive | 2193591 - 2194103 | 18327.9 |
| hypothetical protein | ISP_002089 | Not Available | Positive | 2194100 - 2194804 | 25742.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | ISP_002090 | A4FME8 | Positive | 2194809 - 2195570 | 27753.1 |
| 50s ribosomal protein l19 | ISP_002091 | A4FME7 | Positive | 2195723 - 2196091 | 14053.9 |
| signal peptidase i | ISP_002092 | O33021 | Positive | 2196123 - 2197058 | 33611.2 |
| ribonuclease hii | ISP_002093 | A4FME5 | Positive | 2197149 - 2197991 | 29424.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
