Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ISP_002074 | B4SHW1 | Negative | 2180140 - 2180742 | 21091.9 |
| ggdef domain-containing protein | ISP_002075 | Q73RG3 | Negative | 2180811 - 2182115 | 46531.3 |
| glucose 1-dehydrogenase | ISP_002076 | D4YYG1 | Negative | 2182896 - 2183648 | 24974.6 |
| tetr/acrr family transcriptional regulator | ISP_002077 | Q7WY76 | Negative | 2183672 - 2184259 | 21175.4 |
| hypothetical protein | ISP_002078 | Not Available | Positive | 2184380 - 2184742 | 12092.3 |
| ku protein | ISP_002079 | Q2J6D7 | Positive | 2184795 - 2185676 | 32140.2 |
| marr family transcriptional regulator | ISP_002080 | P9WMF0 | Negative | 2185955 - 2186434 | 17799.2 |
| abc transporter atp-binding protein/permease | ISP_002081 | Q2LVL0 | Negative | 2186444 - 2188222 | 63431.1 |
| signal recognition particle protein | ISP_002082 | P66845 | Positive | 2188418 - 2189956 | 54474.2 |
| amidohydrolase family protein | ISP_002083 | P9WL22 | Positive | 2189965 - 2191041 | 37588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
