Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | ISP_002064 | Q28960 | Negative | 2169602 - 2170453 | 29670.1 |
| lysr family transcriptional regulator | ISP_002065 | P20668 | Positive | 2170524 - 2171432 | 31522.2 |
| sigma-70 family rna polymerase sigma factor | ISP_002066 | L0TCG5 | Positive | 2171516 - 2172370 | 30951.1 |
| (2fe-2s)-binding protein | ISP_002067 | Not Available | Negative | 2172367 - 2172993 | 21752.3 |
| rrna (guanine-n1)-methyltransferase | ISP_002068 | P37000 | Negative | 2173012 - 2173710 | 25291.2 |
| ammonium transporter | ISP_002069 | P63520 | Positive | 2174034 - 2175422 | 47514.9 |
| p-ii family nitrogen regulator | ISP_002070 | P64250 | Positive | 2175419 - 2175757 | 12175.7 |
| [protein-pii] uridylyltransferase | ISP_002071 | A5U6S3 | Positive | 2175768 - 2178077 | 81753.2 |
| fad-dependent monooxygenase | ISP_002072 | L8EUQ6 | Negative | 2178157 - 2179488 | 46288.9 |
| hypothetical protein | ISP_002073 | Not Available | Negative | 2179481 - 2180143 | 24154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
