Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urate oxidase | ISP_002054 | D0VWQ1 | Negative | 2162226 - 2163107 | 32368.0 |
| hydroxyisourate hydrolase | ISP_002055 | Q4VYA5 | Negative | 2163110 - 2163427 | 11205.2 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | ISP_002056 | Q9LVM5 | Negative | 2163424 - 2163873 | 16012.1 |
| helix-turn-helix domain-containing protein | ISP_002057 | Not Available | Negative | 2163953 - 2164429 | 16777.8 |
| allantoinase allb | ISP_002058 | Q82LL4 | Positive | 2164660 - 2165988 | 47285.1 |
| allantoicase | ISP_002059 | Q5YP02 | Positive | 2165990 - 2167003 | 36957.3 |
| hypothetical protein | ISP_002060 | Not Available | Negative | 2167000 - 2167176 | 6073.55 |
| coa-binding protein | ISP_002061 | P75874 | Negative | 2167305 - 2167781 | 17209.6 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | ISP_002062 | A0A0D2YG02 | Negative | 2167778 - 2169064 | 45202.3 |
| voc family protein | ISP_002063 | Not Available | Positive | 2169158 - 2169577 | 15417.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
