Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter dcta | ISP_002044 | B8J708 | Positive | 2150540 - 2151820 | 44934.1 |
| marr family winged helix-turn-helix transcriptional regulator | ISP_002045 | Not Available | Negative | 2151817 - 2152305 | 18005.7 |
| pucr family transcriptional regulator | ISP_002046 | P94536 | Negative | 2152411 - 2153733 | 46266.6 |
| xanthine dehydrogenase family protein subunit m | ISP_002047 | Q46800 | Positive | 2153856 - 2154719 | 30156.1 |
| (2fe-2s)-binding protein | ISP_002048 | Q0QLF3 | Positive | 2154710 - 2155177 | 16337.3 |
| 8-oxoguanine deaminase | ISP_002049 | Q9I6Z0 | Positive | 2155174 - 2156514 | 47114.6 |
| xanthine dehydrogenase subunit d | ISP_002050 | O32144 | Positive | 2156511 - 2158772 | 79864.1 |
| ricin-type beta-trefoil lectin domain protein | ISP_002051 | Q8RX86 | Negative | 2158759 - 2160336 | 55381.5 |
| tetr/acrr family transcriptional regulator | ISP_002052 | P42105 | Negative | 2160451 - 2161011 | 19616.4 |
| is30 family transposase | ISP_002053 | Not Available | Positive | 2161465 - 2161596 | 4558.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
