Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ISP_002014 | P0AGI3 | Negative | 2116533 - 2117576 | 36567.2 |
| sugar abc transporter substrate-binding protein | ISP_002015 | Q4J710 | Negative | 2117573 - 2118571 | 33767.8 |
| tim barrel protein | ISP_002016 | Q5KYR1 | Negative | 2118595 - 2119473 | 30913.7 |
| laci family transcriptional regulator | ISP_002017 | Q8DAQ5 | Positive | 2119585 - 2120622 | 36679.1 |
| gfo/idh/moca family oxidoreductase | ISP_002018 | Q9WYP5 | Positive | 2120704 - 2121702 | 34709.0 |
| asparagine synthase (glutamine-hydrolyzing) | ISP_002019 | O05272 | Negative | 2121725 - 2123566 | 68857.8 |
| k(+)-transporting atpase subunit f | ISP_002020 | Not Available | Positive | 2123969 - 2124070 | 3389.32 |
| potassium-transporting atpase subunit kdpa | ISP_002021 | C1A1E9 | Positive | 2124108 - 2125769 | 57010.8 |
| potassium-transporting atpase subunit kdpb | ISP_002022 | Q9X8Z9 | Positive | 2125766 - 2127811 | 71955.6 |
| potassium-transporting atpase subunit c | ISP_002023 | A6W6R7 | Positive | 2127818 - 2128408 | 19857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
