Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | ISP_002004 | P77735 | Negative | 2105405 - 2106454 | 38105.3 |
| tetr/acrr family transcriptional regulator | ISP_002005 | Q2YWD0 | Positive | 2106554 - 2107129 | 20558.4 |
| discoidin domain-containing protein | ISP_002006 | Q05205 | Positive | 2107418 - 2108974 | 55106.4 |
| mfs transporter | ISP_002007 | Q58713 | Positive | 2108983 - 2110215 | 42274.7 |
| pd40 domain-containing protein | ISP_002008 | Not Available | Positive | 2110212 - 2111165 | 34211.6 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | ISP_002009 | Q5KYR0 | Negative | 2111150 - 2113012 | 65584.3 |
| 5-deoxy-glucuronate isomerase | ISP_002010 | Q5KYR2 | Negative | 2113051 - 2113941 | 32643.2 |
| aldolase | ISP_002011 | Not Available | Negative | 2113938 - 2114834 | 31180.6 |
| 5-dehydro-2-deoxygluconokinase | ISP_002012 | Q6LK43 | Negative | 2114831 - 2115760 | 32344.6 |
| atp-binding cassette domain-containing protein | ISP_002013 | P0DTT6 | Negative | 2115757 - 2116536 | 28148.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
