Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 27 protein | ISP_001983 | Q55B10 | Positive | 2083544 - 2084698 | 41522.8 |
| coa transferase subunit a | ISP_001984 | Q8VPF3 | Positive | 2084872 - 2085681 | 29240.0 |
| coa-transferase subunit beta | ISP_001985 | Q8VPF2 | Positive | 2085678 - 2086436 | 26552.7 |
| thiolase family protein | ISP_001986 | P0C7L3 | Positive | 2086433 - 2087614 | 40904.4 |
| protocatechuate 3,4-dioxygenase subunit beta | ISP_001987 | P15110 | Positive | 2087625 - 2088362 | 27817.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | ISP_001988 | P15109 | Positive | 2088362 - 2088916 | 19883.3 |
| 3-oxoadipate enol-lactonase | ISP_001989 | P00632 | Positive | 2088916 - 2089698 | 27574.4 |
| 4-carboxymuconolactone decarboxylase | ISP_001990 | P20370 | Positive | 2089695 - 2090096 | 14167.6 |
| helix-turn-helix domain-containing protein | ISP_001991 | Q52154 | Positive | 2090106 - 2090939 | 29682.5 |
| nucleotidyltransferase family protein | ISP_001992 | Q93NF6 | Positive | 2091027 - 2091608 | 19788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
