Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | ISP_001973 | Not Available | Negative | 2073144 - 2073623 | 17150.6 |
| hypothetical protein | ISP_001974 | Not Available | Positive | 2073773 - 2074183 | 14838.7 |
| iron-sulfur cluster biosynthesis protein | ISP_001975 | Not Available | Positive | 2074260 - 2074553 | 9814.31 |
| glycerate kinase | ISP_001976 | P42100 | Negative | 2074864 - 2075985 | 36937.2 |
| d-glycerate dehydrogenase | ISP_001977 | Q9C4M5 | Negative | 2075982 - 2076926 | 32802.6 |
| alpha-galactosidase | ISP_001978 | Q9ALJ4 | Negative | 2076957 - 2079053 | 77322.3 |
| rok family protein | ISP_001979 | D2PPN2 | Positive | 2079130 - 2080299 | 40090.8 |
| sugar abc transporter substrate-binding protein | ISP_001980 | P58300 | Positive | 2080319 - 2081581 | 44786.9 |
| sugar abc transporter permease | ISP_001981 | O58968 | Positive | 2081578 - 2082534 | 34229.3 |
| carbohydrate abc transporter permease | ISP_001982 | Q9KEE9 | Positive | 2082534 - 2083367 | 30216.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
