Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | ISP_001963 | P36949 | Positive | 2064968 - 2065999 | 35718.9 |
| sugar abc transporter atp-binding protein | ISP_001964 | Q1AVD3 | Positive | 2065996 - 2067519 | 53740.0 |
| abc transporter permease | ISP_001965 | P44736 | Positive | 2067516 - 2068529 | 34624.3 |
| fadr family transcriptional regulator | ISP_001966 | O07007 | Negative | 2068572 - 2069318 | 26617.6 |
| hypothetical protein | ISP_001967 | Not Available | Positive | 2069400 - 2069543 | 5332.51 |
| aldo/keto reductase | ISP_001968 | Q52472 | Positive | 2069549 - 2070517 | 34460.9 |
| amidohydrolase family protein | ISP_001969 | P55567 | Positive | 2070514 - 2071365 | 30254.9 |
| rna polymerase sigma factor shba | ISP_001970 | P66812 | Negative | 2071401 - 2072057 | 23800.4 |
| duf202 domain-containing protein | ISP_001971 | Not Available | Negative | 2072311 - 2072607 | 9928.16 |
| duf202 domain-containing protein | ISP_001972 | P9WLF4 | Negative | 2072779 - 2073132 | 12143.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
