Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | ISP_001923 | A4FMJ7 | Positive | 2024350 - 2025219 | 32165.4 |
| helix-turn-helix domain-containing protein | ISP_001924 | P9WJB6 | Positive | 2025278 - 2025712 | 16109.0 |
| hypothetical protein | ISP_001925 | Not Available | Positive | 2026206 - 2026691 | 17366.8 |
| hypothetical protein | ISP_001926 | Not Available | Positive | 2026688 - 2027866 | 41620.3 |
| smp-30/gluconolactonase/lre family protein | ISP_001927 | Q01578 | Negative | 2028083 - 2028985 | 33194.3 |
| padr family transcriptional regulator | ISP_001928 | C0H3S6 | Positive | 2029083 - 2029406 | 11751.0 |
| hypothetical protein | ISP_001929 | Not Available | Positive | 2029403 - 2030629 | 43492.4 |
| alpha/beta fold hydrolase | ISP_001930 | P9WNH2 | Positive | 2030713 - 2031675 | 34366.5 |
| magnesium transporter | ISP_001931 | Not Available | Negative | 2031885 - 2032409 | 18414.4 |
| glutamine synthetase family protein | ISP_001932 | O88070 | Positive | 2032621 - 2033985 | 49656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
