Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | ISP_001913 | P0ADY0 | Positive | 2017048 - 2017608 | 18942.5 |
| pantetheine-phosphate adenylyltransferase | ISP_001914 | Q9ZBR1 | Positive | 2017652 - 2018137 | 17868.5 |
| ribonuclease | ISP_001915 | P00650 | Positive | 2018279 - 2018971 | 24193.2 |
| sige family rna polymerase sigma factor | ISP_001916 | Q82EA9 | Positive | 2019035 - 2019535 | 18800.6 |
| hypothetical protein | ISP_001917 | Not Available | Positive | 2019535 - 2020206 | 23732.6 |
| diviva domain-containing protein | ISP_001918 | Q9CBS6 | Positive | 2020319 - 2021047 | 26401.3 |
| yced family protein | ISP_001919 | P9WL16 | Positive | 2021228 - 2021815 | 21145.0 |
| 50s ribosomal protein l32 | ISP_001920 | A4FMJ9 | Positive | 2021903 - 2022085 | 6710.21 |
| ribonuclease iii | ISP_001921 | Q5YS08 | Positive | 2022099 - 2022848 | 26193.3 |
| polysaccharide lyase 6 family protein | ISP_001922 | Q06365 | Positive | 2022936 - 2024291 | 46917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
