Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | ISP_001903 | Not Available | Negative | 2003174 - 2004178 | 35394.5 |
| mce family protein | ISP_001904 | Not Available | Negative | 2004175 - 2005449 | 44442.4 |
| abc transporter permease | ISP_001905 | Q1RGU3 | Negative | 2005446 - 2006297 | 30041.9 |
| abc transporter permease | ISP_001906 | Q68XW4 | Negative | 2006299 - 2007093 | 27644.3 |
| llm class flavin-dependent oxidoreductase | ISP_001907 | O32254 | Negative | 2007559 - 2008551 | 35406.1 |
| fad-dependent monooxygenase | ISP_001908 | Q5YTV5 | Negative | 2008560 - 2009939 | 48930.0 |
| helix-turn-helix domain-containing protein | ISP_001909 | Not Available | Positive | 2009997 - 2010200 | 7194.42 |
| clp protease n-terminal domain-containing protein | ISP_001910 | Not Available | Positive | 2010202 - 2010672 | 16623.3 |
| hypothetical protein | ISP_001911 | Q8YV57 | Positive | 2010749 - 2014528 | 135018.0 |
| aaa family atpase | ISP_001912 | O32215 | Negative | 2014739 - 2016853 | 77899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
