Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | ISP_001873 | P40882 | Positive | 1970895 - 1971425 | 18482.1 |
| uracil-dna glycosylase | ISP_001874 | Q47Q90 | Positive | 1971456 - 1972133 | 24483.3 |
| alpha/beta hydrolase | ISP_001875 | Q88FY3 | Positive | 1972195 - 1972992 | 27825.8 |
| 50s ribosomal protein l28 | ISP_001876 | Q5YRZ6 | Negative | 1973121 - 1973312 | 6845.39 |
| dak2 domain-containing protein | ISP_001877 | O34751 | Positive | 1973447 - 1975021 | 53133.5 |
| atp-dependent dna helicase recg | ISP_001878 | P64323 | Positive | 1975025 - 1977178 | 78152.4 |
| gnat family n-acetyltransferase | ISP_001879 | O32075 | Positive | 1977175 - 1977651 | 17366.6 |
| tetr/acrr family transcriptional regulator | ISP_001880 | P96676 | Negative | 1977611 - 1978246 | 22202.2 |
| erythromycin esterase family protein | ISP_001881 | P05789 | Positive | 1978278 - 1979411 | 39755.5 |
| is30 family transposase | ISP_001882 | Not Available | Positive | 1979466 - 1980107 | 22642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
