Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna degradosome polyphosphate kinase | ISP_001853 | A4TE29 | Negative | 1950786 - 1953167 | 87549.1 |
| 2-phospho-l-lactate guanylyltransferase | ISP_001854 | D2SEH8 | Negative | 1953223 - 1953843 | 21048.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | ISP_001855 | Q59188 | Positive | 1954645 - 1955364 | 26125.6 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | ISP_001856 | Q0S2F8 | Positive | 1955364 - 1956380 | 34984.9 |
| cysteine dioxygenase family protein | ISP_001857 | O32085 | Positive | 1956566 - 1957045 | 17856.0 |
| asparaginase | ISP_001858 | Q9RRX9 | Negative | 1957050 - 1958033 | 33683.4 |
| voc family protein | ISP_001859 | Not Available | Negative | 1958060 - 1958440 | 13879.3 |
| fad:protein fmn transferase | ISP_001860 | A5F5Y3 | Negative | 1958503 - 1959243 | 26213.9 |
| fmn-binding protein | ISP_001861 | Not Available | Negative | 1959240 - 1959764 | 17816.0 |
| ferredoxin reductase family protein | ISP_001862 | Q9KMY3 | Negative | 1959773 - 1961119 | 48822.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
