Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 c-terminal domain-containing protein | ISP_001843 | P14002 | Positive | 1938588 - 1940642 | 72320.6 |
| hypothetical protein | ISP_001844 | Not Available | Negative | 1940647 - 1941225 | 19624.3 |
| hypothetical protein | ISP_001845 | Not Available | Negative | 1941278 - 1941532 | 8887.84 |
| mbl fold metallo-hydrolase | ISP_001846 | Not Available | Negative | 1941623 - 1942330 | 25359.1 |
| iclr family transcriptional regulator | ISP_001847 | A1B8Z4 | Negative | 1942374 - 1943075 | 24344.3 |
| 3-isopropylmalate dehydratase large subunit | ISP_001848 | A4FMP2 | Positive | 1943218 - 1944651 | 51170.0 |
| 3-isopropylmalate dehydratase small subunit | ISP_001849 | A4FMP1 | Positive | 1944673 - 1945275 | 22212.2 |
| hu family dna-binding protein | ISP_001850 | Q9XB18 | Positive | 1945508 - 1946293 | 26452.8 |
| tetratricopeptide repeat protein | ISP_001851 | P25941 | Positive | 1946866 - 1949679 | 100591.0 |
| nudix hydrolase | ISP_001852 | A0QUZ2 | Negative | 1949836 - 1950789 | 34185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
