Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | ISP_001823 | Q72H00 | Positive | 1913512 - 1914246 | 26431.7 |
| Trna-gln | Not Available | Not Available | Positive | 1914297 - 1914368 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1914470 - 1914545 | Not Available |
| hu family dna-binding protein | ISP_001826 | Q9XB18 | Positive | 1915025 - 1915702 | 22740.5 |
| tetratricopeptide repeat protein | ISP_001827 | P25941 | Negative | 1915921 - 1918869 | 106864.0 |
| helix-turn-helix domain-containing protein | ISP_001828 | Not Available | Negative | 1919055 - 1919966 | 32428.5 |
| hypothetical protein | ISP_001829 | Not Available | Negative | 1919979 - 1920188 | 7309.93 |
| sam-dependent methyltransferase | ISP_001830 | Not Available | Positive | 1921463 - 1922329 | 32238.0 |
| duf6292 family protein | ISP_001831 | Not Available | Negative | 1922423 - 1922806 | 13643.7 |
| alpha-l-arabinofuranosidase b | ISP_001832 | A1CGD1 | Negative | 1922914 - 1924449 | 52739.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
